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    Beasts of Beyond OOC Resources Helpful Hub Guide Archives Guide to Cat Genetics

    Guide to Cat Genetics
    wifewoof
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    #1
    05-07-2022, 10:16 AM
    Guide to Cat Genetics

    Overview
    Genetics are confusing on their own, and cat genetics are even more so. This guide aims to help break down and make it easier to understand natural cat genetics for any character you may create. There won't be long scientific rambles, don't worry! I will explain the terms and the process of reaching the genetics you want, so buckle in and grab a pencil.

    Genetics is what makes every living creature have different traits and different looks. Gregor Mendel realized this and began his work on discovering how these traits are passed down and how they cross-breed. Mendel is why we can breed animals and plants to have desirable characteristics or breed negative ones out. He coined most genetic terms and is still referenced by scientists who work with genetics. But, we aren't here to have a seminar on Mendel and how he discovered all this. We're here to dive into how it applies to cat genes.

    So, let's start with the terms!

    Terminology
    ▻ Heredity - The passing of traits from one generation to the next.
    ▻ Genetics - The study of Heredity and the passing of traits.
    ▻ Mono-Hybrid - An individual or strain heterozygous for one specified gene.
        ▹ Mono-Hybrid Cross - This is usually homozygous dominant and homozygous recessive
    ▻ Alleles - The variant form of a gene.
    ▻ Homozygous - Having two identical alleles of a particular gene or genes.
    ▻ Heterozygous - Having two different alleles of a particular gene or genes.
        ▹ Dominant Allele - If the alleles of a gene are different, one allele will be expressed (determined) as the appearance; it is the dominant gene.
        ▹ Recessive Allele - The effect of the other allele, called recessive, is masked. Only is expressed when both alleles are recessive
    ▻ Phenotype - Refers to an observable trait, like hair, fur color, eye color, etc.
    ▻ Genotype - The genetic makeup of an organism. Ex: BBGGDD {B=Black G= Gold D= Dense}
    ▻ Dihybrid - A hybrid that is heterozygous for alleles of two different genes. Usually heterozygoud breeding.
    ▻ Complete Dominance - One allele is dominant and the other is recessive.
    ▻ Incomplete Dominance - When a dominant allele, or form of a gene, does not completely mask the effects of a recessive allele. A blend of both alleles.
    ▻ X-Linked Gene - The gene causing the trait or the disorder is located on the X chromosome. Not epressed the same way in males and females.

    Breaking it Down
    This is where it gets a tad complicated, depending on the cat's coloring. I'd suggest taking notes; that way you can have these in shorthand and easier to access. Now, you can use any letter in the alphabet, except x, for genetics. When you the letter "x," you have another letter than follows.

    Now, let's try a simple punnet square.

    Phenotypes: Purple Flower x White Flower
    Genotype: PP x pp

    The punnet square is set up as follows: the upper part is the mother's traits, which is "pp," and the left side is the father's traits, which in this case is "PP." Now, we're going to cross them.


    "PP" is Homozygous Dominant. "Pp" is Heterozygous. "pp" is Homozygous Recessive.

    Now, back to what we're here for, cat genetics. Let's say we're figuring out the genetics of a black cat with a red tabby cat. The tabby gene will be defined later, but we will disregard it for now. So, during the split of a cell, in Meiosis, the sister chromatids do something called crossing over. The two exchange alleles before becoming a single gamete. A gamete is a single trait, which would be a single letter. This letter signifies dominance or not.

    First, we'll create a key:
    x[sup]r[/sup]x[sup]r[/sup] = red female
    x[sup]B[/sup]x[sup]B[/sup]= black
    x[sup]r[/sup]y = red male
    x[sup]B[/sup]y = black male
    x[sup]B[/sup]x[sup]r[/sup] = tortie
    D = dense
    d = dilute

    We now separate each gamete from the other.

    X[sup]B[/sup]Y = black male
    x[sup]r[/sup]x[sup]r[/sup] = red female

    For our first punnett square, we will not worry about whether or not a cat is dilute or dense. For now, we create a Four-Square punnett square.


    We get three unique genotypes:
    x[sup]B[/sup]x[sup]r[/sup] = black tortie female
    x[sup]B[/sup]Y = black male
    x[sup]b[/sup]Y = red male.

    This is a simple way, but we get more complex as we break down two or more factors. The genotypes above were one of the most difficult of the genotype break down. That was the X-Linked Genotypes. The non-linked are called autosomal; this is when gender doesn't play a factor. Remember the flower punnett square? That one is autosomal. So, we've done two types of punnett squares: X-Linked and Autosomal.

    We will use our key from before:
    x[sup]r[/sup]x[sup]r[/sup] = red female
    x[sup]B[/sup]x[sup]B[/sup]= black
    x[sup]r[/sup]y = red male
    x[sup]B[/sup]y = black male
    x[sup]B[/sup]x[sup]r[/sup] = tortie
    D = dense
    d = dilute

    Now, we'll assume that both are Heterozygous for dilute. This will give us more variations within our new genotypes and a bit more of a challenge.

    We have a dense black male and a dense red female. Both are Heterozygous for dilute. This means that both carry dominant and recessive. The dominant just shows up as the larger lettering of the to and is often the trait that is carried, unless it is certain X-Linked, codominant, incomplete dominance, complete dominance traits.

    Now, the father is going to be black and the mother a black tortie. The father carries no white spotting and neither does the mother. The father is Homozygous for dense and the mother Heterozygous.

    So, we begin crossing these. We pair the genes with each other; we need four down and four across. It can get tricky here.


    The phenotypes are the easy part, these are the physical appearances.

    Phenotypes of Black Male x Black Tortie
    Females: black female homozygous dense, black female heterozygous dense, black tortie homozygous dense, black tortie heterozygous dense
    Males: black homozygous dense, black heterozygous dense, red tabby homozygous dense, red tabby heterozygous dense

    Coats and Coloration/Genotype
    ▻ Black
    Spoiler:
    x[sup]B[/sup]x[sup]B[/sup]D-
    x[sup]B[/sup]YD-
    BBD-
    BbD-
    ▻ Brown
    Spoiler:
    x[sup]b[/sup]x[sup]b[/sup]D-
    x[sup]b[/sup]YD-
    bbD-
    ▻ Blue
    Spoiler:
    x[sup]B[/sup]x[sup]B[/sup]dd
    x[sup]B[/sup]Ydd
    BBdd
    Bbdd
    ▻ Lilac
    Spoiler:
    x[sup]b[/sup]x[sup]b[/sup]dd
    x[sup]b[/sup]Ydd
    bbdd
    ▻ Light Brown/Cinnamon
    Spoiler:
    x[sup]b[sup]1[/sup][/sup]x[sup]b[sup]1[/sup][/sup]D-
    x[sup]b[sup]1[/sup][/sup]YD-
    b[sup]1[/sup]b[sup]1[/sup]D-
    ▻ Fawn
    Spoiler:
    x[sup]b[sup]1[/sup][/sup]x[sup]b[sup]1[/sup][/sup]dd
    x[sup]b[sup]1[/sup][/sup]Ydd
    b[sup]1[/sup]b[sup]1[/sup]dd
    ▻ Red
    Spoiler:
    x[sup]r[/sup] or [sup]o[/sup]x[sup]r[/sup] or [sup]o[/sup]D-
    x[sup]r[/sup] or [sup]o[/sup]YD-
    O(O)D-
    ▻ Cream
    Spoiler:
    x[sup]r[/sup] or [sup]o[/sup]x[sup]r[/sup] or [sup]o[/sup]dd
    x[sup]r[/sup] or [sup]o[/sup]Ydd
    O(O)dd
    ▻ Dominant White
    Spoiler:
    x[sup]W[/sup]x[sup]B/b/R[/sup] or [sup]O/b1b1[/sup]D-
    x[sup]W[/sup]YD-
    W-D-
    ▻ White Spotting
    Spoiler:
    This is an incomplete dominant trait. It will help you to make sure that you include white in your genotypes. You place it as a W in your genotype.

    Chart for the percentage of White Spotting
    [Image: white_spotting.PNG?width=1181&height=541]
    ▻ Agouti
    Spoiler:
    Ticking results from a gene called the agouti gene. This is where some of the hair shafts have a denser pigment to them.

    Ticking (Tabby)/Dominant: A-
    Solid/recessive: aa
    ▻ Tabby Patterns
    Spoiler:
    This chart can explain better, includes Agouti genes.
    [Image: pcmr_723_f1.gif]
    ▻ Chinchilla
    Spoiler:
    Chinchilla, or Ch, comes with an inhibitor gene, or I.

    This gives us the smokes and cameos.
    ▻ Burmese
    Spoiler:
    Burmese cats have separate genotypes.

    BBDD: Sable (Brown)
    BBDd: Sable with Blue (Blue Sepia)
    BbDD: Sable with Champagne (Chocolate Sepia)
    BBdd: Blue
    BbDd: Sable with Blue and Champagne (Tortie)
    Bbdd: Blue with Champagne
    bbDD: Chocolate
    bbDd: Chocolate with Blue
    bbdd: Platinum (Lilac)
    ▻ Points
    Spoiler:
    C[sup]b[/sup]C[sup]b[/sup]=Sepia
    C[sup]s[/sup]C[sup]s[/sup]=Pointed
    C[sup]b[/sup]C[sup]s[/sup]=Mink
    ▻ Rex/Hairless
    Spoiler:
    r = Cornish Rex; recessive
    gr = German Rex; recessive
    re = Devon Rex; recessive
    ro = Oregon Rex (extinct); recessive
    Se = Selkirk Rex; dominant
    Lp = LaPerm; dominant
    h = French Hairless; recessive
    hd = British Hairless; recessive
    Hp = Russian Donsky and Peterbald; dominant
    hr = Canadian Sphynx Cat; recessive
    ▻ Albino
    Spoiler:
    c[sup]b[/sup]c[sup]b[/sup]=Sepia
    c[sup]s[/sup]c[sup]s[/sup]=Pointed
    c[sup]b[/sup]c[sup]s[/sup]=Mink
    Genetic Disorders/Disabilites
    You don't have to do any squares for these since that'll be too much, but if you want a character to have any hereditary disorders or disabilities, take a peek at the links.

    Most Common/Important
    Spoiler:
    ▻ a-mannosidosis
    ▻ Blood group incompatibility
    ▻ Burmese Head Defect
    ▻ Deafness
    ▻ Devon Rex Myopathy
    ▻ Gangliosidosis
    ▻ Glycogen storage disease type IV
    ▻ Hypertrophic cardiomyopathy
    ▻ Hypertrophic muscular dystrophy
    ▻ Hypokalaemic polymyopathy
    ▻ Manx syndrome (spina bifida)
    ▻ Mucopolysaccharidosis
    ▻ Niemann-Pick Disease (sphyngomyelinosis)
    ▻ Osteochondrodysplasia or Scottish Fold disease
    ▻ Polycystic kidney disease
    ▻ Polydactyl cats
    ▻ Progressive retinal atrophy
    ▻ Pyruvate kinase deficiency
    ▻ Spinal muscular atrophy in Maine coons
    Compromise Health/Welfare
    Spoiler:
    ▻ Severe brachycephalic in Persians and similar breeds
    ▻ Hairless cats
    ▻ Short-legged cats
    Possibly Inherited
    Spoiler:
    ▻ Feline orofacial pain syndrome
    ▻ Diabetes mellitus in Burmese cats
    ▻ Asthma in Siamese and related cats
    ▻ Flat chested kittens in Burmese cats
    ▻ Mediastinal lymphoma in Siamese cats
    ▻ Patellar luxation
    ▻ Hip dysplasia
    ▻ Pyloric stenosis or dysfunction in Siamese cats
    ▻ Amyloidosis
    ▻ Small intestinal adenocarcinoma in Siamese cats
    ▻ Strabismus (squint, cross-eyed) in Siamese cats
    Sources
    I adapted the FeralFront post into this; I either rewrote parts or cut out some useless text. I made the punnett square images! I think it's easier to understand with visual aids, and it helps to be able to see how we get the results we got. I'll have links to the templates I used/made easier to write on. Everything else is things I used images from and my own sources. The link to more genetics info is from the FeralFront post. I consider the links for the disorders/disabilities section not needed to be re-linked. Agouti, White Spotting, and Tabby are better to be looked up, as I cannot give perfectly accurate information on how those are carried down; I can estimate and guess, but I cannot give solid answers for those.

    FeralFront Master Genetics Post
    Some info from CFA
    Messybeast, I love this site! Would recommend it heavily!!
    Links to more genetic info if you so wish
    More basic genetics
    More Coat Genetics
    8 Punnett Square Template
    4 Punnett Square Template
    Local Dork | Seto Kaiba Simp
    wifewoof
    MILDLY ACTIVE | You Can't Have All of Me
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